122nd General Meeting of the KCS

Type Symposium
Area Recent Trends in Genome Editing Technique
Room No. Room 314
Time FRI 09:50-:
Code LIFE2-3
Subject Single-molecule FRET study on CRISPR-Cas12a endonuclease
Authors Sanghwa Lee
Advanced Photonics Research Institute, Gwangju Institute of Science and Technology, Korea
Abstract

Cas12a (also called Cpf1) is a representative type V-A CRISPR effector RNA-guided DNA endonuclease, which provides an alternative to type II CRISPR–Cas9 for genome editing. Previous studies have revealed that Cas12a has unique features distinct from Cas9, but the detailed mechanisms of DNA target recognition and cleavage by Cas12a are still unclear. In this work, we directly observe this entire process by using single-molecule fluorescence assays to study Cas12a from Acidaminococcus sp. (AsCas12a). our results reveal that a stable R-loop formation, which is the main determinant of target recognition, is efficiently established only when the seed matches up to 17 base pairs, and AsCas12a ribonucleoproteins induce cleavage in the two DNA strands in a well-defined order, beginning with the non-target strand. Furthermore, the protospacer-adjacent motif (PAM) for AsCas12a makes only a limited contribution of DNA unwinding during R-loop formation and shows a negligible role in the process of DNA cleavage, in contrast to the Cas9 PAM.

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